Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.94■■□□□ 1.74
TMC1Q8TDI8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
TMC1Q8TDI8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
TMC1Q8TDI8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC25.94■■□□□ 1.74
TMC1Q8TDI8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 AC093458.2-201ENST00000623150 629 ntBASIC25.93■■□□□ 1.74
TMC1Q8TDI8 AC116407.4-201ENST00000623319 1061 ntBASIC25.93■■□□□ 1.74
TMC1Q8TDI8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMC1Q8TDI8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 AL136038.3-201ENST00000561909 1096 ntBASIC25.92■■□□□ 1.74
TMC1Q8TDI8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMC1Q8TDI8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 FP475955.4-201ENST00000623131 1990 ntBASIC25.91■■□□□ 1.74
TMC1Q8TDI8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TMC1Q8TDI8 AL109659.2-201ENST00000606809 1674 ntBASIC25.9■■□□□ 1.74
TMC1Q8TDI8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 GRAMD4P1-201ENST00000435181 1110 ntBASIC25.9■■□□□ 1.74
TMC1Q8TDI8 SPDYE13P-201ENST00000445314 798 ntBASIC25.9■■□□□ 1.74
TMC1Q8TDI8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 SEC1P-202ENST00000473944 940 ntBASIC25.9■■□□□ 1.74
TMC1Q8TDI8 AC034232.1-201ENST00000506026 1064 ntBASIC25.9■■□□□ 1.74
TMC1Q8TDI8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 AC112497.1-201ENST00000624824 639 ntBASIC25.9■■□□□ 1.74
TMC1Q8TDI8 AC004408.2-201ENST00000623613 2777 ntBASIC25.9■■□□□ 1.74
TMC1Q8TDI8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMC1Q8TDI8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 HBZP1-201ENST00000354915 429 ntBASIC25.89■■□□□ 1.74
TMC1Q8TDI8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMC1Q8TDI8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.73
TMC1Q8TDI8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TMC1Q8TDI8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
TMC1Q8TDI8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
TMC1Q8TDI8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TMC1Q8TDI8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.88■■□□□ 1.73
TMC1Q8TDI8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TMC1Q8TDI8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms