Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 AC005332.3-201ENST00000589904 676 ntBASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 AP003733.1-201ENST00000491725 852 ntBASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 IGHV3-41-201ENST00000613121 348 ntBASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNPOQ8N3V7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 AL158211.5-201ENST00000623583 2518 ntBASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNPOQ8N3V7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 RCC2P3-201ENST00000418112 1537 ntBASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 Z69720.1-201ENST00000601483 472 ntBASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 AL390719.2-201ENST00000606993 987 ntBASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 AL512353.2-201ENST00000448759 1962 ntBASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SYNPOQ8N3V7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms