Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 AP000593.1-201ENST00000393668 712 ntBASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 AL445675.2-201ENST00000620291 557 ntBASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 AC131212.4-201ENST00000623606 975 ntBASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 AC139713.2-201ENST00000641328 2723 ntBASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01561Q8N1V8 AC099398.1-201ENST00000567919 2776 ntBASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 AL139384.1-201ENST00000612143 3047 ntBASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC01561Q8N1V8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 KRT16P5-201ENST00000455284 522 ntBASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 KRT8P11-201ENST00000409686 1436 ntBASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 FLJ13224-201ENST00000313737 1514 ntBASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01561Q8N1V8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AL357033.4-201ENST00000617703 1807 ntBASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AL356309.3-201ENST00000624132 1934 ntBASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AC008556.1-201ENST00000610908 2040 ntBASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms