Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCXQ7RTU7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.34□□□□□ -0.43
SCXQ7RTU7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
SCXQ7RTU7 TMEM179-206ENST00000616017 1645 ntBASIC12.33□□□□□ -0.43
SCXQ7RTU7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 LIN28AP1-201ENST00000429574 405 ntBASIC12.33□□□□□ -0.44
SCXQ7RTU7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 ATP5G1P1-201ENST00000448724 379 ntBASIC12.33□□□□□ -0.44
SCXQ7RTU7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 RCC2P6-201ENST00000526625 1557 ntBASIC12.33□□□□□ -0.44
SCXQ7RTU7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SCXQ7RTU7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCXQ7RTU7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCXQ7RTU7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms