Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 AC106730.1-201ENST00000566722 1090 ntBASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 MIR3917-201ENST00000580971 93 ntBASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
OTOP1Q7RTM1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 Z69720.1-201ENST00000601483 472 ntBASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 IGHV3-41-201ENST00000613121 348 ntBASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
OTOP1Q7RTM1 SLC25A24-204ENST00000569674 2357 ntBASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 AC007952.6-201ENST00000573168 2673 ntBASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 AC003957.1-201ENST00000625108 2673 ntBASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 IGHV3-47-201ENST00000425060 335 ntBASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 RNPS1P1-201ENST00000507437 918 ntBASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.55■■□□□ 1.04
OTOP1Q7RTM1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 AL031284.1-201ENST00000419297 478 ntBASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 AC005104.2-201ENST00000427818 678 ntBASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 TERC-201ENST00000602385 541 ntBASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 AL355385.1-201ENST00000606123 409 ntBASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.54■■□□□ 1.04
OTOP1Q7RTM1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms