Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.52■□□□□ 0.08
VPS13CQ709C8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.52■□□□□ 0.08
VPS13CQ709C8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13CQ709C8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.52■□□□□ 0.08
VPS13CQ709C8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13CQ709C8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
VPS13CQ709C8 GPX1P2-201ENST00000429271 606 ntBASIC15.52■□□□□ 0.08
VPS13CQ709C8 FAM197Y8-203ENST00000450145 560 ntBASIC15.52■□□□□ 0.08
VPS13CQ709C8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
VPS13CQ709C8 AL049840.3-201ENST00000602669 611 ntBASIC15.52■□□□□ 0.08
VPS13CQ709C8 LINC01521-201ENST00000504184 1943 ntBASIC15.52■□□□□ 0.08
VPS13CQ709C8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13CQ709C8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13CQ709C8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13CQ709C8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
VPS13CQ709C8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13CQ709C8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13CQ709C8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 AC012640.2-201ENST00000561606 901 ntBASIC15.52■□□□□ 0.07
VPS13CQ709C8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.52■□□□□ 0.07
VPS13CQ709C8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
VPS13CQ709C8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 AL109659.2-201ENST00000606809 1674 ntBASIC15.52■□□□□ 0.07
VPS13CQ709C8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.52■□□□□ 0.07
VPS13CQ709C8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.52■□□□□ 0.07
VPS13CQ709C8 AC010327.4-202ENST00000591484 748 ntBASIC15.52■□□□□ 0.07
VPS13CQ709C8 AC116407.3-201ENST00000623905 1129 ntBASIC15.52■□□□□ 0.07
VPS13CQ709C8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13CQ709C8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
VPS13CQ709C8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AC034105.1-201ENST00000563488 319 ntBASIC15.51■□□□□ 0.07
VPS13CQ709C8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 TP73-AS1-207ENST00000624167 988 ntBASIC15.51■□□□□ 0.07
VPS13CQ709C8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 KRT8P3-201ENST00000519669 1449 ntBASIC15.51■□□□□ 0.07
VPS13CQ709C8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13CQ709C8 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.51■□□□□ 0.07
VPS13CQ709C8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS13CQ709C8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13CQ709C8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 AC096582.2-201ENST00000510860 516 ntBASIC15.5■□□□□ 0.07
VPS13CQ709C8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13CQ709C8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
VPS13CQ709C8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13CQ709C8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms