Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 MOK-233ENST00000524214 1539 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 AK1-201ENST00000223836 736 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 SUDS3P1-201ENST00000505831 966 ntBASIC11.83□□□□□ -0.52
LINC00575Q6W349 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 NXN-202ENST00000537628 1340 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00575Q6W349 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00575Q6W349 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 HEIH-201ENST00000623091 1652 ntBASIC11.82□□□□□ -0.52
LINC00575Q6W349 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 TSPY21P-201ENST00000433481 731 ntBASIC11.82□□□□□ -0.52
LINC00575Q6W349 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 KRT18P14-201ENST00000534205 1250 ntBASIC11.82□□□□□ -0.52
LINC00575Q6W349 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 GALNS-213ENST00000569433 723 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 AC080080.1-201ENST00000625121 2420 ntBASIC11.82□□□□□ -0.52
LINC00575Q6W349 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00575Q6W349 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00575Q6W349 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 AD000864.1-201ENST00000624076 2295 ntBASIC11.81□□□□□ -0.52
LINC00575Q6W349 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00575Q6W349 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00575Q6W349 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms