Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DQA1Q5Y7H0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DQA1Q5Y7H0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DQA1Q5Y7H0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DQA1Q5Y7H0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.39■□□□□ 0.38
HLA-DQA1Q5Y7H0 AL109659.2-201ENST00000606809 1674 ntBASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 MIR3180-5-201ENST00000583743 153 ntBASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 AC012306.2-201ENST00000609350 630 ntBASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 AC018445.3-201ENST00000624177 1945 ntBASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 HEIH-201ENST00000623091 1652 ntBASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DQA1Q5Y7H0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 AC113347.1-201ENST00000413321 391 ntBASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQA1Q5Y7H0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms