Protein–RNA interactions for Protein: Q5MAI5

CDKL4, Cyclin-dependent kinase-like 4, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4Q5MAI5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CDKL4Q5MAI5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 BX088651.1-201ENST00000540551 451 ntBASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 C2orf69P3-201ENST00000565542 1120 ntBASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 MIR4674-201ENST00000582457 87 ntBASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 AC010653.2-201ENST00000623505 997 ntBASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 AC116562.4-202ENST00000641738 218 ntBASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 NEFHP1-201ENST00000412845 2629 ntBASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKL4Q5MAI5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 TSPY14P-201ENST00000303979 915 ntBASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 AP003041.3-201ENST00000527151 707 ntBASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 MIR4497-201ENST00000583208 89 ntBASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 AP000525.1-201ENST00000608286 694 ntBASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CDKL4Q5MAI5 KRT8P50-201ENST00000562022 1438 ntBASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 SNORA78-201ENST00000459373 127 ntBASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 AL390961.4-201ENST00000623958 2535 ntBASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 ABALON-201ENST00000629058 1903 ntBASIC18.06■□□□□ 0.48
CDKL4Q5MAI5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL4Q5MAI5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL4Q5MAI5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL4Q5MAI5 AC036111.1-201ENST00000533973 1582 ntBASIC18.05■□□□□ 0.48
CDKL4Q5MAI5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms