Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 ECEL1P3-201ENST00000427961 737 ntBASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 KRT18P23-201ENST00000435622 1283 ntBASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 AC009947.2-201ENST00000444014 672 ntBASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 AL138966.2-201ENST00000621997 464 ntBASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRICKLE4Q2TBC4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.33■□□□□ 0.37
PRICKLE4Q2TBC4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 AC010203.1-204ENST00000548782 407 ntBASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 LINC01023-201ENST00000606054 436 ntBASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 AC005363.2-201ENST00000618631 242 ntBASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE4Q2TBC4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC009113.1-201ENST00000570267 2443 ntBASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC090164.3-201ENST00000610780 2143 ntBASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC104581.1-202ENST00000635932 2618 ntBASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC113347.1-201ENST00000413321 391 ntBASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 NEK4P2-201ENST00000580004 1012 ntBASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 AC112497.1-201ENST00000624824 639 ntBASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE4Q2TBC4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms