Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDS5AQ29RF7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.34■■□□□ 1.17
PDS5AQ29RF7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 AC005332.3-201ENST00000589904 676 ntBASIC22.33■■□□□ 1.17
PDS5AQ29RF7 GPR32P1-201ENST00000601788 811 ntBASIC22.33■■□□□ 1.17
PDS5AQ29RF7 AC092119.3-201ENST00000612618 583 ntBASIC22.33■■□□□ 1.17
PDS5AQ29RF7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDS5AQ29RF7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 Z83836.1-201ENST00000624605 1642 ntBASIC22.33■■□□□ 1.16
PDS5AQ29RF7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PDS5AQ29RF7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 DRAXINP1-201ENST00000437611 948 ntBASIC22.32■■□□□ 1.16
PDS5AQ29RF7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 KRT126P-201ENST00000549467 1181 ntBASIC22.32■■□□□ 1.16
PDS5AQ29RF7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 AC112777.1-201ENST00000540175 1423 ntBASIC22.32■■□□□ 1.16
PDS5AQ29RF7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PDS5AQ29RF7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 AC092329.2-201ENST00000598402 547 ntBASIC22.31■■□□□ 1.16
PDS5AQ29RF7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 AP002414.4-201ENST00000589764 1148 ntBASIC22.31■■□□□ 1.16
PDS5AQ29RF7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.31■■□□□ 1.16
PDS5AQ29RF7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 TPSP2-201ENST00000561760 610 ntBASIC22.3■■□□□ 1.16
PDS5AQ29RF7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDS5AQ29RF7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms