Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HSPG2P98160 GAS2L1P1-201ENST00000420145 1480 ntBASIC11.53□□□□□ -0.56
HSPG2P98160 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.53□□□□□ -0.56
HSPG2P98160 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HSPG2P98160 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC11.52□□□□□ -0.56
HSPG2P98160 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HSPG2P98160 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.52□□□□□ -0.56
HSPG2P98160 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.52□□□□□ -0.56
HSPG2P98160 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.52□□□□□ -0.56
HSPG2P98160 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HSPG2P98160 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HSPG2P98160 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
HSPG2P98160 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.52□□□□□ -0.56
HSPG2P98160 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
HSPG2P98160 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
HSPG2P98160 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.52□□□□□ -0.57
HSPG2P98160 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.52□□□□□ -0.57
HSPG2P98160 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.52□□□□□ -0.57
HSPG2P98160 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.52□□□□□ -0.57
HSPG2P98160 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HSPG2P98160 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.52□□□□□ -0.57
HSPG2P98160 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HSPG2P98160 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC11.52□□□□□ -0.57
HSPG2P98160 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC11.52□□□□□ -0.57
HSPG2P98160 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
HSPG2P98160 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HSPG2P98160 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
HSPG2P98160 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HSPG2P98160 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.52□□□□□ -0.57
HSPG2P98160 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.52□□□□□ -0.57
HSPG2P98160 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.52□□□□□ -0.57
HSPG2P98160 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HSPG2P98160 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC11.52□□□□□ -0.57
HSPG2P98160 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
HSPG2P98160 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HSPG2P98160 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
HSPG2P98160 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.51□□□□□ -0.57
HSPG2P98160 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.51□□□□□ -0.57
HSPG2P98160 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.51□□□□□ -0.57
HSPG2P98160 MEIS3P1-201ENST00000495167 958 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.51□□□□□ -0.57
HSPG2P98160 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC11.51□□□□□ -0.57
HSPG2P98160 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.51□□□□□ -0.57
HSPG2P98160 ELL2P1-201ENST00000413990 1906 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC11.51□□□□□ -0.57
HSPG2P98160 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 AP002472.1-201ENST00000577490 586 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
HSPG2P98160 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 AL356309.3-201ENST00000624132 1934 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
HSPG2P98160 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 RNA5SP416-201ENST00000516838 111 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 AC005498.2-205ENST00000593218 784 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.51□□□□□ -0.57
HSPG2P98160 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 AC002310.6-201ENST00000624451 1377 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 HLA-V-201ENST00000429037 534 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HSPG2P98160 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.51□□□□□ -0.57
HSPG2P98160 AL513190.1-201ENST00000621254 727 ntBASIC11.51□□□□□ -0.57
HSPG2P98160 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.51□□□□□ -0.57
HSPG2P98160 AL391422.3-201ENST00000603791 2761 ntBASIC11.5□□□□□ -0.57
HSPG2P98160 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HSPG2P98160 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.5□□□□□ -0.57
HSPG2P98160 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.5□□□□□ -0.57
HSPG2P98160 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.5□□□□□ -0.57
HSPG2P98160 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HSPG2P98160 AL512408.1-201ENST00000569378 2000 ntBASIC11.5□□□□□ -0.57
HSPG2P98160 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HSPG2P98160 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HSPG2P98160 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HSPG2P98160 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HSPG2P98160 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC11.5□□□□□ -0.57
HSPG2P98160 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.5□□□□□ -0.57
HSPG2P98160 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HSPG2P98160 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms