Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.55■□□□□ 0.56
NUBP1P53384 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUBP1P53384 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
NUBP1P53384 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NUBP1P53384 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NUBP1P53384 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.54■□□□□ 0.56
NUBP1P53384 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 RCN1P2-201ENST00000398357 915 ntBASIC18.54■□□□□ 0.56
NUBP1P53384 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.54■□□□□ 0.56
NUBP1P53384 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.54■□□□□ 0.56
NUBP1P53384 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC18.54■□□□□ 0.56
NUBP1P53384 EIF2S2P3-201ENST00000428356 999 ntBASIC18.54■□□□□ 0.56
NUBP1P53384 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.54■□□□□ 0.56
NUBP1P53384 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.54■□□□□ 0.56
NUBP1P53384 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NUBP1P53384 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.54■□□□□ 0.56
NUBP1P53384 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.54■□□□□ 0.56
NUBP1P53384 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.54■□□□□ 0.56
NUBP1P53384 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.54■□□□□ 0.56
NUBP1P53384 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.54■□□□□ 0.56
NUBP1P53384 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NUBP1P53384 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.53■□□□□ 0.56
NUBP1P53384 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.53■□□□□ 0.56
NUBP1P53384 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.53■□□□□ 0.56
NUBP1P53384 AL049829.1-201ENST00000465411 156 ntBASIC18.53■□□□□ 0.56
NUBP1P53384 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
NUBP1P53384 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC18.53■□□□□ 0.56
NUBP1P53384 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.53■□□□□ 0.56
NUBP1P53384 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.53■□□□□ 0.56
NUBP1P53384 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.53■□□□□ 0.56
NUBP1P53384 AC008735.5-201ENST00000623544 497 ntBASIC18.53■□□□□ 0.56
NUBP1P53384 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NUBP1P53384 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.53■□□□□ 0.56
NUBP1P53384 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.53■□□□□ 0.56
NUBP1P53384 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NUBP1P53384 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NUBP1P53384 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.52■□□□□ 0.56
NUBP1P53384 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.52■□□□□ 0.56
NUBP1P53384 MIR770-201ENST00000390219 98 ntBASIC18.52■□□□□ 0.56
NUBP1P53384 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.52■□□□□ 0.56
NUBP1P53384 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NUBP1P53384 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.52■□□□□ 0.56
NUBP1P53384 MTND2P9-201ENST00000422293 931 ntBASIC18.52■□□□□ 0.56
NUBP1P53384 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.52■□□□□ 0.56
NUBP1P53384 RSL24D1P2-201ENST00000445584 366 ntBASIC18.52■□□□□ 0.56
NUBP1P53384 YBX1P5-201ENST00000509441 847 ntBASIC18.52■□□□□ 0.56
NUBP1P53384 AC009533.2-201ENST00000543664 586 ntBASIC18.52■□□□□ 0.56
NUBP1P53384 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.52■□□□□ 0.56
NUBP1P53384 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NUBP1P53384 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC18.52■□□□□ 0.56
NUBP1P53384 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NUBP1P53384 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC18.52■□□□□ 0.55
NUBP1P53384 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NUBP1P53384 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.52■□□□□ 0.55
NUBP1P53384 TP73-AS1-210ENST00000637775 1455 ntBASIC18.52■□□□□ 0.55
NUBP1P53384 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.51■□□□□ 0.55
NUBP1P53384 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.51■□□□□ 0.55
NUBP1P53384 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NUBP1P53384 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NUBP1P53384 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.51■□□□□ 0.55
NUBP1P53384 MCCD1P2-201ENST00000423228 335 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms