Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF144AP50876 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF144AP50876 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF144AP50876 ANO7L1-203ENST00000602586 1720 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF144AP50876 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF144AP50876 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF144AP50876 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF144AP50876 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF144AP50876 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF144AP50876 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF144AP50876 AC116562.2-201ENST00000507042 360 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 PRSS44-201ENST00000515154 1146 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF144AP50876 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF144AP50876 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RNF144AP50876 AP000692.2-201ENST00000608391 879 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 AC066615.1-201ENST00000640911 628 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF144AP50876 AC083906.6-201ENST00000641366 219 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 AP006294.2-201ENST00000641667 209 ntBASIC17.35■□□□□ 0.37
RNF144AP50876 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF144AP50876 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF144AP50876 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF144AP50876 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF144AP50876 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF144AP50876 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF144AP50876 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF144AP50876 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF144AP50876 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF144AP50876 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF144AP50876 RBM17P1-201ENST00000453646 1190 ntBASIC17.34■□□□□ 0.37
RNF144AP50876 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF144AP50876 AL355075.4-201ENST00000554988 638 ntBASIC17.34■□□□□ 0.37
RNF144AP50876 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF144AP50876 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF144AP50876 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 AC008622.2-201ENST00000617006 1229 ntBASIC17.34■□□□□ 0.37
RNF144AP50876 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF144AP50876 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF144AP50876 AC126763.1-201ENST00000552015 2118 ntBASIC17.33■□□□□ 0.37
RNF144AP50876 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF144AP50876 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF144AP50876 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF144AP50876 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF144AP50876 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF144AP50876 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF144AP50876 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF144AP50876 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF144AP50876 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF144AP50876 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF144AP50876 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF144AP50876 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF144AP50876 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF144AP50876 AL596275.1-201ENST00000423464 877 ntBASIC17.33■□□□□ 0.36
RNF144AP50876 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF144AP50876 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF144AP50876 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF144AP50876 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF144AP50876 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RNF144AP50876 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF144AP50876 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF144AP50876 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF144AP50876 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF144AP50876 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF144AP50876 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF144AP50876 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RNF144AP50876 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 RCC2P3-201ENST00000418112 1537 ntBASIC17.32■□□□□ 0.36
RNF144AP50876 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF144AP50876 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms