Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TUBP50607 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBP50607 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TUBP50607 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TUBP50607 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBP50607 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBP50607 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBP50607 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.63■□□□□ 0.73
TUBP50607 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBP50607 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.63■□□□□ 0.73
TUBP50607 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.63■□□□□ 0.73
TUBP50607 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TUBP50607 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.63■□□□□ 0.73
TUBP50607 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBP50607 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBP50607 AL109659.2-201ENST00000606809 1674 ntBASIC19.62■□□□□ 0.73
TUBP50607 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TUBP50607 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.62■□□□□ 0.73
TUBP50607 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBP50607 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.62■□□□□ 0.73
TUBP50607 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TUBP50607 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.62■□□□□ 0.73
TUBP50607 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBP50607 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBP50607 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.62■□□□□ 0.73
TUBP50607 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBP50607 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TUBP50607 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBP50607 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TUBP50607 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBP50607 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 AL512353.2-201ENST00000448759 1962 ntBASIC19.61■□□□□ 0.73
TUBP50607 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TUBP50607 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBP50607 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
TUBP50607 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBP50607 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBP50607 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.61■□□□□ 0.73
TUBP50607 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.61■□□□□ 0.73
TUBP50607 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TUBP50607 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TUBP50607 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBP50607 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBP50607 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TUBP50607 AC036111.1-201ENST00000533973 1582 ntBASIC19.61■□□□□ 0.73
TUBP50607 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TUBP50607 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TUBP50607 STARP1-201ENST00000397973 869 ntBASIC19.6■□□□□ 0.73
TUBP50607 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TUBP50607 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TUBP50607 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.6■□□□□ 0.73
TUBP50607 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBP50607 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.6■□□□□ 0.73
TUBP50607 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.6■□□□□ 0.73
TUBP50607 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms