Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.64■□□□□ 0.89
CPT1AP50416 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.64■□□□□ 0.89
CPT1AP50416 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 PCDHAC2-203ENST00000615316 3011 ntBASIC20.64■□□□□ 0.89
CPT1AP50416 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CPT1AP50416 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 AC079781.3-201ENST00000449110 356 ntBASIC20.64■□□□□ 0.89
CPT1AP50416 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.64■□□□□ 0.89
CPT1AP50416 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.64■□□□□ 0.89
CPT1AP50416 RN7SL606P-201ENST00000472779 293 ntBASIC20.64■□□□□ 0.89
CPT1AP50416 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.64■□□□□ 0.89
CPT1AP50416 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.64■□□□□ 0.89
CPT1AP50416 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.64■□□□□ 0.89
CPT1AP50416 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPT1AP50416 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.64■□□□□ 0.89
CPT1AP50416 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.64■□□□□ 0.89
CPT1AP50416 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
CPT1AP50416 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CPT1AP50416 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.64■□□□□ 0.89
CPT1AP50416 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.63■□□□□ 0.89
CPT1AP50416 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CPT1AP50416 AL353692.3-201ENST00000407031 1396 ntBASIC20.63■□□□□ 0.89
CPT1AP50416 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.63■□□□□ 0.89
CPT1AP50416 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.63■□□□□ 0.89
CPT1AP50416 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.63■□□□□ 0.89
CPT1AP50416 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.63■□□□□ 0.89
CPT1AP50416 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.63■□□□□ 0.89
CPT1AP50416 IGHV3-47-201ENST00000425060 335 ntBASIC20.63■□□□□ 0.89
CPT1AP50416 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CPT1AP50416 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.63■□□□□ 0.89
CPT1AP50416 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 AL353801.3-201ENST00000609898 542 ntBASIC20.63■□□□□ 0.89
CPT1AP50416 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 HEIH-201ENST00000623091 1652 ntBASIC20.63■□□□□ 0.89
CPT1AP50416 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPT1AP50416 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.63■□□□□ 0.89
CPT1AP50416 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.63■□□□□ 0.89
CPT1AP50416 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CPT1AP50416 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
CPT1AP50416 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CPT1AP50416 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.62■□□□□ 0.89
CPT1AP50416 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CPT1AP50416 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.62■□□□□ 0.89
CPT1AP50416 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.62■□□□□ 0.89
CPT1AP50416 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.62■□□□□ 0.89
CPT1AP50416 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.62■□□□□ 0.89
CPT1AP50416 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CPT1AP50416 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 AL357033.4-201ENST00000617703 1807 ntBASIC20.62■□□□□ 0.89
CPT1AP50416 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.62■□□□□ 0.89
CPT1AP50416 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.62■□□□□ 0.89
CPT1AP50416 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPT1AP50416 KRT8P50-201ENST00000562022 1438 ntBASIC20.61■□□□□ 0.89
CPT1AP50416 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CPT1AP50416 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CPT1AP50416 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CPT1AP50416 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 AP000593.1-201ENST00000393668 712 ntBASIC20.61■□□□□ 0.89
CPT1AP50416 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CPT1AP50416 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.61■□□□□ 0.89
CPT1AP50416 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms