Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
LHX1P48742 AC091076.1-201ENST00000610741 619 ntBASIC19.75■□□□□ 0.75
LHX1P48742 AC083849.1-201ENST00000615227 514 ntBASIC19.75■□□□□ 0.75
LHX1P48742 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX1P48742 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX1P48742 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX1P48742 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX1P48742 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX1P48742 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX1P48742 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.75■□□□□ 0.75
LHX1P48742 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.74■□□□□ 0.75
LHX1P48742 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LHX1P48742 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LHX1P48742 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LHX1P48742 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LHX1P48742 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.74■□□□□ 0.75
LHX1P48742 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.74■□□□□ 0.75
LHX1P48742 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.74■□□□□ 0.75
LHX1P48742 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.74■□□□□ 0.75
LHX1P48742 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LHX1P48742 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 KRT8P50-201ENST00000562022 1438 ntBASIC19.74■□□□□ 0.75
LHX1P48742 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LHX1P48742 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.74■□□□□ 0.75
LHX1P48742 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
LHX1P48742 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LHX1P48742 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX1P48742 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.74■□□□□ 0.75
LHX1P48742 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.73■□□□□ 0.75
LHX1P48742 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.73■□□□□ 0.75
LHX1P48742 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.73■□□□□ 0.75
LHX1P48742 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.73■□□□□ 0.75
LHX1P48742 AC092597.1-201ENST00000487352 616 ntBASIC19.73■□□□□ 0.75
LHX1P48742 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.73■□□□□ 0.75
LHX1P48742 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.73■□□□□ 0.75
LHX1P48742 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LHX1P48742 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX1P48742 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
LHX1P48742 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
LHX1P48742 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.72■□□□□ 0.75
LHX1P48742 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.72■□□□□ 0.75
LHX1P48742 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 PCED1CP-201ENST00000419887 785 ntBASIC19.72■□□□□ 0.75
LHX1P48742 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.72■□□□□ 0.75
LHX1P48742 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.72■□□□□ 0.75
LHX1P48742 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 AL358472.4-201ENST00000633140 710 ntBASIC19.72■□□□□ 0.75
LHX1P48742 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.72■□□□□ 0.75
LHX1P48742 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX1P48742 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
LHX1P48742 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
LHX1P48742 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LHX1P48742 AC112777.1-201ENST00000540175 1423 ntBASIC19.71■□□□□ 0.75
LHX1P48742 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LHX1P48742 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms