Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SSR1P43307 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.83■□□□□ 0.77
SSR1P43307 AC093525.10-201ENST00000625130 1569 ntBASIC19.83■□□□□ 0.77
SSR1P43307 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SSR1P43307 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SSR1P43307 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSR1P43307 AL359736.2-201ENST00000621992 437 ntBASIC19.83■□□□□ 0.77
SSR1P43307 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSR1P43307 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SSR1P43307 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSR1P43307 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSR1P43307 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSR1P43307 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.83■□□□□ 0.76
SSR1P43307 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SSR1P43307 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSR1P43307 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.83■□□□□ 0.76
SSR1P43307 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SSR1P43307 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.82■□□□□ 0.76
SSR1P43307 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.82■□□□□ 0.76
SSR1P43307 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSR1P43307 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.82■□□□□ 0.76
SSR1P43307 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.82■□□□□ 0.76
SSR1P43307 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SSR1P43307 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.82■□□□□ 0.76
SSR1P43307 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.82■□□□□ 0.76
SSR1P43307 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 AL356309.3-201ENST00000624132 1934 ntBASIC19.82■□□□□ 0.76
SSR1P43307 ANO7L1-203ENST00000602586 1720 ntBASIC19.82■□□□□ 0.76
SSR1P43307 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.82■□□□□ 0.76
SSR1P43307 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSR1P43307 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.81■□□□□ 0.76
SSR1P43307 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.81■□□□□ 0.76
SSR1P43307 AC005082.1-201ENST00000413042 2259 ntBASIC19.81■□□□□ 0.76
SSR1P43307 AC009113.1-201ENST00000570267 2443 ntBASIC19.81■□□□□ 0.76
SSR1P43307 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 AC004951.3-201ENST00000418645 1148 ntBASIC19.81■□□□□ 0.76
SSR1P43307 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.81■□□□□ 0.76
SSR1P43307 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.81■□□□□ 0.76
SSR1P43307 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SSR1P43307 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SSR1P43307 AF186192.3-201ENST00000583427 947 ntBASIC19.81■□□□□ 0.76
SSR1P43307 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.81■□□□□ 0.76
SSR1P43307 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.81■□□□□ 0.76
SSR1P43307 AL353708.3-201ENST00000610272 989 ntBASIC19.81■□□□□ 0.76
SSR1P43307 ITM2C-210ENST00000620962 501 ntBASIC19.81■□□□□ 0.76
SSR1P43307 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.81■□□□□ 0.76
SSR1P43307 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.81■□□□□ 0.76
SSR1P43307 RCC2P6-201ENST00000526625 1557 ntBASIC19.81■□□□□ 0.76
SSR1P43307 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SSR1P43307 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.81■□□□□ 0.76
SSR1P43307 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.81■□□□□ 0.76
SSR1P43307 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSR1P43307 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
SSR1P43307 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.8■□□□□ 0.76
SSR1P43307 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.8■□□□□ 0.76
SSR1P43307 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.8■□□□□ 0.76
SSR1P43307 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SSR1P43307 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SSR1P43307 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.8■□□□□ 0.76
SSR1P43307 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms