Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
RFC5P40937 AC091076.1-201ENST00000610741 619 ntBASIC20.58■□□□□ 0.89
RFC5P40937 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC5P40937 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC5P40937 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.58■□□□□ 0.88
RFC5P40937 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RFC5P40937 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RFC5P40937 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC5P40937 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.58■□□□□ 0.88
RFC5P40937 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RFC5P40937 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
RFC5P40937 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.58■□□□□ 0.88
RFC5P40937 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC5P40937 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC5P40937 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RFC5P40937 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.58■□□□□ 0.88
RFC5P40937 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RFC5P40937 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RFC5P40937 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RFC5P40937 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RFC5P40937 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC5P40937 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.57■□□□□ 0.88
RFC5P40937 FAM86EP-206ENST00000510506 987 ntBASIC20.57■□□□□ 0.88
RFC5P40937 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC5P40937 AL136038.3-201ENST00000561909 1096 ntBASIC20.57■□□□□ 0.88
RFC5P40937 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.57■□□□□ 0.88
RFC5P40937 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RFC5P40937 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC5P40937 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC5P40937 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC5P40937 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC5P40937 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RFC5P40937 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC5P40937 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC5P40937 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RFC5P40937 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC5P40937 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC5P40937 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RFC5P40937 KRT8P50-201ENST00000562022 1438 ntBASIC20.56■□□□□ 0.88
RFC5P40937 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC5P40937 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC5P40937 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC5P40937 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC5P40937 AC092597.1-201ENST00000487352 616 ntBASIC20.56■□□□□ 0.88
RFC5P40937 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC5P40937 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.56■□□□□ 0.88
RFC5P40937 AC009065.1-201ENST00000564055 1225 ntBASIC20.56■□□□□ 0.88
RFC5P40937 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFC5P40937 AL358472.4-201ENST00000633140 710 ntBASIC20.56■□□□□ 0.88
RFC5P40937 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC5P40937 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFC5P40937 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC5P40937 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
RFC5P40937 AC087289.5-201ENST00000586076 3175 ntBASIC20.55■□□□□ 0.88
RFC5P40937 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.55■□□□□ 0.88
RFC5P40937 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 VENTXP5-201ENST00000523979 775 ntBASIC20.55■□□□□ 0.88
RFC5P40937 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.55■□□□□ 0.88
RFC5P40937 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.55■□□□□ 0.88
RFC5P40937 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.55■□□□□ 0.88
RFC5P40937 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC5P40937 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RFC5P40937 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
RFC5P40937 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 AC079602.3-201ENST00000623931 403 ntBASIC20.54■□□□□ 0.88
RFC5P40937 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.54■□□□□ 0.88
RFC5P40937 AP000550.4-202ENST00000639755 178 ntBASIC20.54■□□□□ 0.88
RFC5P40937 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.54■□□□□ 0.88
RFC5P40937 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC5P40937 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.54■□□□□ 0.88
RFC5P40937 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms