Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TREX1-205ENST00000625293 1783 ntBASIC23.4■■□□□ 1.34
RFC4P35249 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RFC4P35249 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RFC4P35249 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.4■■□□□ 1.34
RFC4P35249 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RFC4P35249 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.4■■□□□ 1.34
RFC4P35249 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RFC4P35249 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RFC4P35249 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
RFC4P35249 AC008608.2-201ENST00000606089 416 ntBASIC23.4■■□□□ 1.34
RFC4P35249 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.4■■□□□ 1.34
RFC4P35249 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.4■■□□□ 1.34
RFC4P35249 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RFC4P35249 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RFC4P35249 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.4■■□□□ 1.34
RFC4P35249 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RFC4P35249 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.39■■□□□ 1.34
RFC4P35249 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RFC4P35249 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.39■■□□□ 1.34
RFC4P35249 PMS2P7-201ENST00000506558 1336 ntBASIC23.39■■□□□ 1.34
RFC4P35249 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RFC4P35249 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.39■■□□□ 1.33
RFC4P35249 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFC4P35249 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFC4P35249 AC132008.2-207ENST00000454517 770 ntBASIC23.39■■□□□ 1.33
RFC4P35249 AC096582.2-201ENST00000510860 516 ntBASIC23.39■■□□□ 1.33
RFC4P35249 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.39■■□□□ 1.33
RFC4P35249 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.39■■□□□ 1.33
RFC4P35249 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RFC4P35249 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.39■■□□□ 1.33
RFC4P35249 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.39■■□□□ 1.33
RFC4P35249 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RFC4P35249 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RFC4P35249 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.38■■□□□ 1.33
RFC4P35249 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFC4P35249 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFC4P35249 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFC4P35249 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RFC4P35249 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.38■■□□□ 1.33
RFC4P35249 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
RFC4P35249 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.38■■□□□ 1.33
RFC4P35249 TERC-201ENST00000602385 541 ntBASIC23.38■■□□□ 1.33
RFC4P35249 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RFC4P35249 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.38■■□□□ 1.33
RFC4P35249 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFC4P35249 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.38■■□□□ 1.33
RFC4P35249 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RFC4P35249 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFC4P35249 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFC4P35249 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RFC4P35249 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.37■■□□□ 1.33
RFC4P35249 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFC4P35249 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFC4P35249 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.37■■□□□ 1.33
RFC4P35249 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RFC4P35249 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFC4P35249 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RFC4P35249 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.37■■□□□ 1.33
RFC4P35249 MIR940-201ENST00000401276 94 ntBASIC23.37■■□□□ 1.33
RFC4P35249 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.37■■□□□ 1.33
RFC4P35249 AC092183.1-201ENST00000469884 875 ntBASIC23.37■■□□□ 1.33
RFC4P35249 RPL13AP23-201ENST00000480739 586 ntBASIC23.37■■□□□ 1.33
RFC4P35249 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RFC4P35249 AC114341.1-201ENST00000618070 349 ntBASIC23.37■■□□□ 1.33
RFC4P35249 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFC4P35249 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RFC4P35249 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.37■■□□□ 1.33
RFC4P35249 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RFC4P35249 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.37■■□□□ 1.33
RFC4P35249 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RFC4P35249 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.36■■□□□ 1.33
RFC4P35249 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFC4P35249 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFC4P35249 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.36■■□□□ 1.33
RFC4P35249 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RFC4P35249 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFC4P35249 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.36■■□□□ 1.33
RFC4P35249 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.36■■□□□ 1.33
RFC4P35249 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
RFC4P35249 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.36■■□□□ 1.33
RFC4P35249 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RFC4P35249 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.36■■□□□ 1.33
RFC4P35249 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.36■■□□□ 1.33
RFC4P35249 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.36■■□□□ 1.33
RFC4P35249 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.36■■□□□ 1.33
RFC4P35249 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
RFC4P35249 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RFC4P35249 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
RFC4P35249 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFC4P35249 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.36■■□□□ 1.33
RFC4P35249 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.35■■□□□ 1.33
RFC4P35249 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.35■■□□□ 1.33
RFC4P35249 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.35■■□□□ 1.33
RFC4P35249 AC018712.1-201ENST00000455767 687 ntBASIC23.35■■□□□ 1.33
RFC4P35249 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFC4P35249 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms