Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN1O95832 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN1O95832 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLDN1O95832 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN1O95832 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLDN1O95832 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN1O95832 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN1O95832 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN1O95832 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN1O95832 AL353801.3-201ENST00000609898 542 ntBASIC16.64■□□□□ 0.25
CLDN1O95832 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN1O95832 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN1O95832 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 IL9RP2-201ENST00000423948 1312 ntBASIC16.64■□□□□ 0.25
CLDN1O95832 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN1O95832 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN1O95832 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN1O95832 FAM220CP-201ENST00000395253 831 ntBASIC16.63■□□□□ 0.25
CLDN1O95832 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN1O95832 SLC25A1P1-201ENST00000528351 927 ntBASIC16.63■□□□□ 0.25
CLDN1O95832 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.63■□□□□ 0.25
CLDN1O95832 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.63■□□□□ 0.25
CLDN1O95832 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN1O95832 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN1O95832 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN1O95832 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN1O95832 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CLDN1O95832 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN1O95832 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN1O95832 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN1O95832 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN1O95832 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN1O95832 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN1O95832 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN1O95832 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN1O95832 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN1O95832 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN1O95832 AC090340.1-201ENST00000620778 4980 ntBASIC16.62■□□□□ 0.25
CLDN1O95832 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN1O95832 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN1O95832 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN1O95832 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN1O95832 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN1O95832 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN1O95832 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN1O95832 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN1O95832 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CLDN1O95832 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN1O95832 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN1O95832 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN1O95832 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN1O95832 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN1O95832 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
CLDN1O95832 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLDN1O95832 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN1O95832 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLDN1O95832 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLDN1O95832 HLA-F-220ENST00000434407 884 ntBASIC16.61■□□□□ 0.25
CLDN1O95832 AC104819.1-201ENST00000504587 486 ntBASIC16.61■□□□□ 0.25
CLDN1O95832 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN1O95832 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN1O95832 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN1O95832 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN1O95832 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN1O95832 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN1O95832 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN1O95832 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms