Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
GGPS1O95749 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
GGPS1O95749 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
GGPS1O95749 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.91■□□□□ 0.94
GGPS1O95749 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 TSSC2-201ENST00000450217 709 ntBASIC20.91■□□□□ 0.94
GGPS1O95749 BX276092.5-203ENST00000456199 560 ntBASIC20.91■□□□□ 0.94
GGPS1O95749 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.91■□□□□ 0.94
GGPS1O95749 AL121672.3-201ENST00000608644 468 ntBASIC20.91■□□□□ 0.94
GGPS1O95749 AC016734.2-201ENST00000624325 1377 ntBASIC20.91■□□□□ 0.94
GGPS1O95749 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.91■□□□□ 0.94
GGPS1O95749 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.91■□□□□ 0.94
GGPS1O95749 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GGPS1O95749 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.9■□□□□ 0.94
GGPS1O95749 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
GGPS1O95749 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
GGPS1O95749 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
GGPS1O95749 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.9■□□□□ 0.94
GGPS1O95749 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.9■□□□□ 0.94
GGPS1O95749 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
GGPS1O95749 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.9■□□□□ 0.94
GGPS1O95749 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.9■□□□□ 0.94
GGPS1O95749 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.9■□□□□ 0.94
GGPS1O95749 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.9■□□□□ 0.94
GGPS1O95749 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.9■□□□□ 0.94
GGPS1O95749 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
GGPS1O95749 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
GGPS1O95749 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
GGPS1O95749 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
GGPS1O95749 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.89■□□□□ 0.94
GGPS1O95749 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GGPS1O95749 AC093525.10-201ENST00000625130 1569 ntBASIC20.89■□□□□ 0.94
GGPS1O95749 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
GGPS1O95749 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GGPS1O95749 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.89■□□□□ 0.93
GGPS1O95749 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
GGPS1O95749 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.89■□□□□ 0.93
GGPS1O95749 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.89■□□□□ 0.93
GGPS1O95749 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.89■□□□□ 0.93
GGPS1O95749 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.89■□□□□ 0.93
GGPS1O95749 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
GGPS1O95749 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.89■□□□□ 0.93
GGPS1O95749 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.89■□□□□ 0.93
GGPS1O95749 AL121894.2-201ENST00000602977 491 ntBASIC20.89■□□□□ 0.93
GGPS1O95749 AC012313.10-201ENST00000623509 926 ntBASIC20.89■□□□□ 0.93
GGPS1O95749 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
GGPS1O95749 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.89■□□□□ 0.93
GGPS1O95749 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.89■□□□□ 0.93
GGPS1O95749 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GGPS1O95749 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.88■□□□□ 0.93
GGPS1O95749 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.88■□□□□ 0.93
GGPS1O95749 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
GGPS1O95749 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
GGPS1O95749 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.88■□□□□ 0.93
GGPS1O95749 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms