Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.71■■□□□ 1.55
LTN1O94822 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC24.71■■□□□ 1.55
LTN1O94822 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
LTN1O94822 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LTN1O94822 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LTN1O94822 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC24.7■■□□□ 1.55
LTN1O94822 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
LTN1O94822 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.7■■□□□ 1.55
LTN1O94822 AL773604.1-201ENST00000617417 272 ntBASIC24.7■■□□□ 1.55
LTN1O94822 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LTN1O94822 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LTN1O94822 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
LTN1O94822 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.7■■□□□ 1.54
LTN1O94822 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
LTN1O94822 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LTN1O94822 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
LTN1O94822 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LTN1O94822 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
LTN1O94822 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LTN1O94822 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
LTN1O94822 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.69■■□□□ 1.54
LTN1O94822 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC24.69■■□□□ 1.54
LTN1O94822 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LTN1O94822 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LTN1O94822 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LTN1O94822 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
LTN1O94822 EMD-201ENST00000369835 966 ntTSL 3 BASIC24.69■■□□□ 1.54
LTN1O94822 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC24.69■■□□□ 1.54
LTN1O94822 AC008608.2-201ENST00000606089 416 ntBASIC24.69■■□□□ 1.54
LTN1O94822 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.69■■□□□ 1.54
LTN1O94822 VPS51-217ENST00000639871 243 ntTSL 5 BASIC24.69■■□□□ 1.54
LTN1O94822 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.69■■□□□ 1.54
LTN1O94822 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LTN1O94822 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC24.69■■□□□ 1.54
LTN1O94822 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
LTN1O94822 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
LTN1O94822 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.68■■□□□ 1.54
LTN1O94822 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LTN1O94822 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC24.68■■□□□ 1.54
LTN1O94822 AC096582.2-201ENST00000510860 516 ntBASIC24.68■■□□□ 1.54
LTN1O94822 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
LTN1O94822 AP001005.1-201ENST00000571755 1248 ntBASIC24.68■■□□□ 1.54
LTN1O94822 GXYLT1P4-201ENST00000613576 1192 ntBASIC24.68■■□□□ 1.54
LTN1O94822 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.68■■□□□ 1.54
LTN1O94822 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
LTN1O94822 NARF-204ENST00000390006 1766 ntTSL 2 BASIC24.68■■□□□ 1.54
LTN1O94822 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LTN1O94822 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC24.68■■□□□ 1.54
LTN1O94822 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LTN1O94822 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LTN1O94822 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
LTN1O94822 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.67■■□□□ 1.54
LTN1O94822 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 CALM1-205ENST00000553542 877 ntTSL 5 BASIC24.67■■□□□ 1.54
LTN1O94822 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC24.67■■□□□ 1.54
LTN1O94822 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.67■■□□□ 1.54
LTN1O94822 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.67■■□□□ 1.54
LTN1O94822 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.67■■□□□ 1.54
LTN1O94822 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.67■■□□□ 1.54
LTN1O94822 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
LTN1O94822 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
LTN1O94822 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.67■■□□□ 1.54
LTN1O94822 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.67■■□□□ 1.54
LTN1O94822 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.67■■□□□ 1.54
LTN1O94822 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC24.67■■□□□ 1.54
LTN1O94822 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LTN1O94822 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LTN1O94822 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.66■■□□□ 1.54
LTN1O94822 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
LTN1O94822 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LTN1O94822 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LTN1O94822 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC24.66■■□□□ 1.54
LTN1O94822 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
LTN1O94822 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LTN1O94822 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
LTN1O94822 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC24.66■■□□□ 1.54
LTN1O94822 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LTN1O94822 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
LTN1O94822 AC018712.1-201ENST00000455767 687 ntBASIC24.65■■□□□ 1.54
LTN1O94822 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC24.65■■□□□ 1.54
LTN1O94822 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC24.65■■□□□ 1.54
LTN1O94822 AL024508.2-201ENST00000607749 1894 ntBASIC24.65■■□□□ 1.54
LTN1O94822 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC24.65■■□□□ 1.54
LTN1O94822 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms