Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PRPF40AO75400 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PRPF40AO75400 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 POU5F1P3-201ENST00000428824 1078 ntBASIC21.68■■□□□ 1.06
PRPF40AO75400 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PRPF40AO75400 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.68■■□□□ 1.06
PRPF40AO75400 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 MTMR9LP-203ENST00000426597 1545 ntBASIC21.68■■□□□ 1.06
PRPF40AO75400 RCC2P6-201ENST00000526625 1557 ntBASIC21.68■■□□□ 1.06
PRPF40AO75400 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PRPF40AO75400 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PRPF40AO75400 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF40AO75400 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRPF40AO75400 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PRPF40AO75400 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.67■■□□□ 1.06
PRPF40AO75400 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRPF40AO75400 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.67■■□□□ 1.06
PRPF40AO75400 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PRPF40AO75400 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.67■■□□□ 1.06
PRPF40AO75400 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.67■■□□□ 1.06
PRPF40AO75400 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
PRPF40AO75400 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.67■■□□□ 1.06
PRPF40AO75400 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.67■■□□□ 1.06
PRPF40AO75400 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF40AO75400 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.66■■□□□ 1.06
PRPF40AO75400 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
PRPF40AO75400 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.66■■□□□ 1.06
PRPF40AO75400 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PRPF40AO75400 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.66■■□□□ 1.06
PRPF40AO75400 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.66■■□□□ 1.06
PRPF40AO75400 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.66■■□□□ 1.06
PRPF40AO75400 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.66■■□□□ 1.06
PRPF40AO75400 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF40AO75400 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.66■■□□□ 1.06
PRPF40AO75400 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF40AO75400 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF40AO75400 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PRPF40AO75400 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF40AO75400 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PRPF40AO75400 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.65■■□□□ 1.06
PRPF40AO75400 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.65■■□□□ 1.06
PRPF40AO75400 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF40AO75400 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.65■■□□□ 1.06
PRPF40AO75400 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms