Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT3O75175 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT3O75175 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT3O75175 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CNOT3O75175 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT3O75175 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CNOT3O75175 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CNOT3O75175 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.07■□□□□ 0.48
CNOT3O75175 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.07■□□□□ 0.48
CNOT3O75175 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CNOT3O75175 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.07■□□□□ 0.48
CNOT3O75175 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.07■□□□□ 0.48
CNOT3O75175 CKBP1-201ENST00000565489 1086 ntBASIC18.07■□□□□ 0.48
CNOT3O75175 AL049597.2-201ENST00000565575 961 ntBASIC18.07■□□□□ 0.48
CNOT3O75175 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT3O75175 AL023803.3-201ENST00000615559 522 ntBASIC18.07■□□□□ 0.48
CNOT3O75175 AC006011.2-201ENST00000621313 1158 ntBASIC18.07■□□□□ 0.48
CNOT3O75175 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.07■□□□□ 0.48
CNOT3O75175 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT3O75175 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.07■□□□□ 0.48
CNOT3O75175 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CNOT3O75175 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.07■□□□□ 0.48
CNOT3O75175 AC104417.2-201ENST00000562989 1793 ntBASIC18.07■□□□□ 0.48
CNOT3O75175 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 AC092338.2-201ENST00000568827 1415 ntBASIC18.06■□□□□ 0.48
CNOT3O75175 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.06■□□□□ 0.48
CNOT3O75175 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.06■□□□□ 0.48
CNOT3O75175 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.06■□□□□ 0.48
CNOT3O75175 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CNOT3O75175 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.06■□□□□ 0.48
CNOT3O75175 AC007663.1-201ENST00000438948 1240 ntBASIC18.06■□□□□ 0.48
CNOT3O75175 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.06■□□□□ 0.48
CNOT3O75175 AC128688.1-201ENST00000487626 519 ntBASIC18.06■□□□□ 0.48
CNOT3O75175 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CNOT3O75175 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.06■□□□□ 0.48
CNOT3O75175 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.06■□□□□ 0.48
CNOT3O75175 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.06■□□□□ 0.48
CNOT3O75175 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 AL133373.2-201ENST00000623187 2828 ntBASIC18.06■□□□□ 0.48
CNOT3O75175 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 KRT8P11-201ENST00000409686 1436 ntBASIC18.06■□□□□ 0.48
CNOT3O75175 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT3O75175 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CNOT3O75175 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CNOT3O75175 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CNOT3O75175 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.05■□□□□ 0.48
CNOT3O75175 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CNOT3O75175 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 SLC25A1P2-201ENST00000430693 912 ntBASIC18.05■□□□□ 0.48
CNOT3O75175 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CNOT3O75175 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.05■□□□□ 0.48
CNOT3O75175 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.05■□□□□ 0.48
CNOT3O75175 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNOT3O75175 AC116562.4-202ENST00000641738 218 ntBASIC18.05■□□□□ 0.48
CNOT3O75175 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CNOT3O75175 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.05■□□□□ 0.48
CNOT3O75175 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.05■□□□□ 0.48
CNOT3O75175 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.05■□□□□ 0.48
CNOT3O75175 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CNOT3O75175 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNOT3O75175 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNOT3O75175 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.05■□□□□ 0.48
CNOT3O75175 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT3O75175 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.05■□□□□ 0.48
CNOT3O75175 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms