Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 AC133552.2-202ENST00000575694 574 ntBASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV18A0A075B6X5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV18A0A075B6X5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 TSPY23P-201ENST00000440136 739 ntBASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 MIR6821-201ENST00000617625 74 ntBASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV18A0A075B6X5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms