Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 PRELID1P1-202ENST00000567272 903 ntBASIC19.5■□□□□ 0.71
YIPF1Q9Y548 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 AL357033.4-201ENST00000617703 1807 ntBASIC19.5■□□□□ 0.71
YIPF1Q9Y548 Z83836.1-201ENST00000624605 1642 ntBASIC19.5■□□□□ 0.71
YIPF1Q9Y548 MTMR9LP-203ENST00000426597 1545 ntBASIC19.5■□□□□ 0.71
YIPF1Q9Y548 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
YIPF1Q9Y548 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 KRT18P1-202ENST00000452408 1331 ntBASIC19.49■□□□□ 0.71
YIPF1Q9Y548 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
YIPF1Q9Y548 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 AP003733.1-201ENST00000491725 852 ntBASIC19.48■□□□□ 0.71
YIPF1Q9Y548 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 AC005332.3-201ENST00000589904 676 ntBASIC19.48■□□□□ 0.71
YIPF1Q9Y548 AL691432.3-201ENST00000621860 400 ntBASIC19.48■□□□□ 0.71
YIPF1Q9Y548 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 KRT8P50-201ENST00000562022 1438 ntBASIC19.48■□□□□ 0.71
YIPF1Q9Y548 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.48■□□□□ 0.71
YIPF1Q9Y548 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 AL161938.1-201ENST00000569833 2180 ntBASIC19.47■□□□□ 0.71
YIPF1Q9Y548 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.47■□□□□ 0.71
YIPF1Q9Y548 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 AL390719.2-201ENST00000606993 987 ntBASIC19.47■□□□□ 0.71
YIPF1Q9Y548 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
YIPF1Q9Y548 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.46■□□□□ 0.71
YIPF1Q9Y548 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YIPF1Q9Y548 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
YIPF1Q9Y548 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
YIPF1Q9Y548 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.46■□□□□ 0.71
YIPF1Q9Y548 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms