Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 AC092597.1-201ENST00000487352 616 ntBASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE7Q9UBL6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AC006333.2-201ENST00000607957 2099 ntBASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AC104390.1-201ENST00000555663 520 ntBASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 MIR3917-201ENST00000580971 93 ntBASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AC116407.4-201ENST00000623319 1061 ntBASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 AL157888.1-201ENST00000631930 593 ntBASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.1■□□□□ 0.49
CPNE7Q9UBL6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE7Q9UBL6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.08■□□□□ 0.49
CPNE7Q9UBL6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 AC010240.3-201ENST00000607688 395 ntBASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms