Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 AP006294.2-201ENST00000641667 209 ntBASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LIN7CQ9NUP9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 AL135905.2-201ENST00000584934 1404 ntBASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 AL353807.1-201ENST00000427475 662 ntBASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 RARRES2P10-201ENST00000564312 460 ntBASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LIN7CQ9NUP9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 AC018470.1-201ENST00000624790 3129 ntBASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 AC073592.3-201ENST00000625118 1834 ntBASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 NOC2LP1-202ENST00000452600 2235 ntBASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LIN7CQ9NUP9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms