Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSNK1G1Q9HCP0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 AC112777.1-201ENST00000540175 1423 ntBASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 HLA-F-220ENST00000434407 884 ntBASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 ZNF444P1-201ENST00000559497 298 ntBASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CSNK1G1Q9HCP0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 AP000974.1-201ENST00000623909 2387 ntBASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 AL136038.3-201ENST00000561909 1096 ntBASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 AC018445.3-201ENST00000624177 1945 ntBASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 ANO7L1-203ENST00000602586 1720 ntBASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 AL163051.1-201ENST00000569214 1512 ntBASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G1Q9HCP0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 AL499627.1-201ENST00000569373 2188 ntBASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 PVRIG2P-201ENST00000435460 978 ntBASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 AL391807.1-203ENST00000604392 2365 ntBASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 MYLKP1-201ENST00000509077 1580 ntBASIC19.49■□□□□ 0.71
CSNK1G1Q9HCP0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 AC009065.1-201ENST00000564055 1225 ntBASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CSNK1G1Q9HCP0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms