Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 AC098831.1-202ENST00000438821 336 ntBASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2OQ9C0C9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 AP003733.1-201ENST00000491725 852 ntBASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2OQ9C0C9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 NSUN5P1-202ENST00000421140 1535 ntBASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 NSUN5P2-203ENST00000457352 1529 ntBASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 MIR3180-5-201ENST00000583743 153 ntBASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2OQ9C0C9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 AL023284.2-201ENST00000405850 579 ntBASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 RPS8P6-201ENST00000426177 609 ntBASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 VENTXP7-201ENST00000475503 772 ntBASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 AC139887.3-201ENST00000568585 713 ntBASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 AP001160.2-201ENST00000596071 487 ntBASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 AL390719.2-201ENST00000606993 987 ntBASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2OQ9C0C9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBE2OQ9C0C9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UBE2OQ9C0C9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
UBE2OQ9C0C9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
UBE2OQ9C0C9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
UBE2OQ9C0C9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBE2OQ9C0C9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms