Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TP73-AS1-207ENST00000624167 988 ntBASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDH11XQ9BZA7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC24.2■■□□□ 1.47
PCDH11XQ9BZA7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDH11XQ9BZA7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 AF238378.1-201ENST00000526806 358 ntBASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 BX640515.1-201ENST00000617215 977 ntBASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH11XQ9BZA7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 AL671883.3-201ENST00000603274 991 ntBASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH11XQ9BZA7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 MINOS1P3-201ENST00000457048 203 ntBASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH11XQ9BZA7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 HES2-202ENST00000377836 507 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 AC011840.4-201ENST00000578471 627 ntBASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH11XQ9BZA7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 HEIH-201ENST00000623091 1652 ntBASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 EMD-201ENST00000369835 966 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 RNA5SP419-201ENST00000515908 135 ntBASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 BNIP3P18-201ENST00000593976 575 ntBASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH11XQ9BZA7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms