Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC093503.3-201ENST00000624917 2352 ntBASIC11.13□□□□□ -0.63
LIMD2Q9BT23 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 AC069544.1-201ENST00000609399 999 ntBASIC11.13□□□□□ -0.63
LIMD2Q9BT23 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 LINC01465-201ENST00000408887 1940 ntBASIC11.13□□□□□ -0.63
LIMD2Q9BT23 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC11.13□□□□□ -0.63
LIMD2Q9BT23 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 MST1L-201ENST00000442552 2185 ntBASIC11.12□□□□□ -0.63
LIMD2Q9BT23 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 KRT18P6-201ENST00000555540 1265 ntBASIC11.12□□□□□ -0.63
LIMD2Q9BT23 EMC9-206ENST00000560403 872 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LIMD2Q9BT23 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms