Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SMOQ99835 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.59■□□□□ 0.73
SMOQ99835 KRT18P41-201ENST00000518924 1277 ntBASIC19.59■□□□□ 0.73
SMOQ99835 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 MIR3917-201ENST00000580971 93 ntBASIC19.59■□□□□ 0.73
SMOQ99835 AC010240.3-201ENST00000607688 395 ntBASIC19.59■□□□□ 0.73
SMOQ99835 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.59■□□□□ 0.73
SMOQ99835 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.59■□□□□ 0.73
SMOQ99835 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.59■□□□□ 0.73
SMOQ99835 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.59■□□□□ 0.73
SMOQ99835 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMOQ99835 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMOQ99835 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SMOQ99835 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMOQ99835 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.58■□□□□ 0.73
SMOQ99835 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.58■□□□□ 0.73
SMOQ99835 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.58■□□□□ 0.73
SMOQ99835 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.58■□□□□ 0.73
SMOQ99835 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMOQ99835 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMOQ99835 AL671277.2-201ENST00000458060 996 ntBASIC19.58■□□□□ 0.72
SMOQ99835 AC092597.1-201ENST00000487352 616 ntBASIC19.58■□□□□ 0.72
SMOQ99835 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.58■□□□□ 0.72
SMOQ99835 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SMOQ99835 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SMOQ99835 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.58■□□□□ 0.72
SMOQ99835 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SMOQ99835 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMOQ99835 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMOQ99835 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMOQ99835 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.58■□□□□ 0.72
SMOQ99835 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SMOQ99835 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SMOQ99835 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
SMOQ99835 AL499627.1-201ENST00000569373 2188 ntBASIC19.57■□□□□ 0.72
SMOQ99835 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SMOQ99835 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SMOQ99835 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 AC034232.1-201ENST00000506026 1064 ntBASIC19.57■□□□□ 0.72
SMOQ99835 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.57■□□□□ 0.72
SMOQ99835 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.57■□□□□ 0.72
SMOQ99835 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SMOQ99835 AC079602.3-201ENST00000623931 403 ntBASIC19.57■□□□□ 0.72
SMOQ99835 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.57■□□□□ 0.72
SMOQ99835 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.57■□□□□ 0.72
SMOQ99835 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SMOQ99835 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.57■□□□□ 0.72
SMOQ99835 AC093525.10-201ENST00000625130 1569 ntBASIC19.57■□□□□ 0.72
SMOQ99835 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMOQ99835 CROCCP3-202ENST00000420820 1947 ntBASIC19.57■□□□□ 0.72
SMOQ99835 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SMOQ99835 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.56■□□□□ 0.72
SMOQ99835 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.56■□□□□ 0.72
SMOQ99835 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.56■□□□□ 0.72
SMOQ99835 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
SMOQ99835 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 AC083849.1-201ENST00000615227 514 ntBASIC19.56■□□□□ 0.72
SMOQ99835 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMOQ99835 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
SMOQ99835 AC098818.2-201ENST00000564925 2320 ntBASIC19.56■□□□□ 0.72
SMOQ99835 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SMOQ99835 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMOQ99835 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms