Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF2Q99496 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RNF2Q99496 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RNF2Q99496 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF2Q99496 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF2Q99496 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF2Q99496 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RNF2Q99496 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF2Q99496 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF2Q99496 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 SDHAP1-207ENST00000440850 2000 ntBASIC14.87□□□□□ -0.03
RNF2Q99496 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF2Q99496 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF2Q99496 AL139384.1-201ENST00000612143 3047 ntBASIC14.87□□□□□ -0.03
RNF2Q99496 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF2Q99496 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 PRKY-204ENST00000533551 1019 ntBASIC14.87□□□□□ -0.03
RNF2Q99496 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF2Q99496 AC069544.1-201ENST00000609399 999 ntBASIC14.87□□□□□ -0.03
RNF2Q99496 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF2Q99496 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF2Q99496 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF2Q99496 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF2Q99496 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RNF2Q99496 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RNF2Q99496 AL162741.1-201ENST00000565563 1558 ntBASIC14.86□□□□□ -0.03
RNF2Q99496 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF2Q99496 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF2Q99496 YBX1P10-201ENST00000444752 975 ntBASIC14.86□□□□□ -0.03
RNF2Q99496 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF2Q99496 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
RNF2Q99496 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF2Q99496 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF2Q99496 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF2Q99496 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF2Q99496 AC233263.1-201ENST00000578059 224 ntBASIC14.86□□□□□ -0.03
RNF2Q99496 AC006058.3-201ENST00000606217 1069 ntBASIC14.86□□□□□ -0.03
RNF2Q99496 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF2Q99496 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF2Q99496 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RNF2Q99496 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF2Q99496 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
RNF2Q99496 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 ABALON-201ENST00000629058 1903 ntBASIC14.86□□□□□ -0.03
RNF2Q99496 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF2Q99496 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF2Q99496 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
RNF2Q99496 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms