Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.89■□□□□ 0.13
CSMD1Q96PZ7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 SCARNA2-201ENST00000458748 420 ntBASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 AL356488.2-201ENST00000602755 427 ntBASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 MIR1199-201ENST00000621445 119 ntBASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 AC012640.2-201ENST00000561606 901 ntBASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 AC145285.3-201ENST00000564603 959 ntBASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSMD1Q96PZ7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 AL591424.1-201ENST00000442569 1213 ntBASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 KRT18P3-201ENST00000451602 1288 ntBASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 AL592071.1-201ENST00000611956 408 ntBASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 FAM197Y3-203ENST00000618346 717 ntBASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 AC090616.6-201ENST00000582640 721 ntBASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CSMD1Q96PZ7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 AC106028.4-201ENST00000614509 607 ntBASIC15.86■□□□□ 0.13
CSMD1Q96PZ7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms