Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 AC246785.2-201ENST00000432512 513 ntBASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNGAP1Q96PV0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SYNGAP1Q96PV0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 AL512353.2-201ENST00000448759 1962 ntBASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 RCC2P3-201ENST00000418112 1537 ntBASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 KRT18P23-201ENST00000435622 1283 ntBASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 FAAHP1-202ENST00000446499 1238 ntBASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 AC104390.1-201ENST00000555663 520 ntBASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.2■□□□□ 0.98
SYNGAP1Q96PV0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 DRAXINP1-201ENST00000437611 948 ntBASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 AC006538.3-201ENST00000612495 578 ntBASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 KRT18P1-202ENST00000452408 1331 ntBASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNGAP1Q96PV0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 AP000593.1-201ENST00000393668 712 ntBASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 TPSP2-201ENST00000561760 610 ntBASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 AC010240.3-201ENST00000607688 395 ntBASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms