Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 AC018695.7-201ENST00000624587 2492 ntBASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 MCRIP2P1-201ENST00000394346 511 ntBASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 TSPY7P-201ENST00000431358 1114 ntBASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 LINC00896-202ENST00000609602 2128 ntBASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.31■□□□□ 0.36
COX4I2Q96KJ9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 POM121L13P-201ENST00000422362 380 ntBASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 AC091799.1-201ENST00000422823 811 ntBASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 AC008764.6-201ENST00000595909 2069 ntBASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COX4I2Q96KJ9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COX4I2Q96KJ9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms