Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 POM121L3P-201ENST00000419331 1163 ntBASIC20.19■□□□□ 0.82
LRCH3Q96II8 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 AC132008.2-207ENST00000454517 770 ntBASIC20.19■□□□□ 0.82
LRCH3Q96II8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRCH3Q96II8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRCH3Q96II8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH3Q96II8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH3Q96II8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH3Q96II8 AP006288.1-201ENST00000446065 395 ntBASIC20.18■□□□□ 0.82
LRCH3Q96II8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 AC011467.4-201ENST00000594891 528 ntBASIC20.18■□□□□ 0.82
LRCH3Q96II8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH3Q96II8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH3Q96II8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.18■□□□□ 0.82
LRCH3Q96II8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRCH3Q96II8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 RPS2P28-201ENST00000314255 741 ntBASIC20.17■□□□□ 0.82
LRCH3Q96II8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 MIR770-201ENST00000390219 98 ntBASIC20.17■□□□□ 0.82
LRCH3Q96II8 AL023284.2-201ENST00000405850 579 ntBASIC20.17■□□□□ 0.82
LRCH3Q96II8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 PAWRP1-201ENST00000451083 565 ntBASIC20.17■□□□□ 0.82
LRCH3Q96II8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 GUSBP12-201ENST00000513727 720 ntBASIC20.17■□□□□ 0.82
LRCH3Q96II8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 BNIP3P18-201ENST00000593976 575 ntBASIC20.17■□□□□ 0.82
LRCH3Q96II8 GPR32P1-201ENST00000601788 811 ntBASIC20.17■□□□□ 0.82
LRCH3Q96II8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.17■□□□□ 0.82
LRCH3Q96II8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRCH3Q96II8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 AC004832.2-201ENST00000426397 482 ntBASIC20.16■□□□□ 0.82
LRCH3Q96II8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRCH3Q96II8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRCH3Q96II8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRCH3Q96II8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms