Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 AC073508.3-201ENST00000619697 1419 ntBASIC21.21■□□□□ 0.99
TNFRSF25Q93038 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 NEFHP1-201ENST00000412845 2629 ntBASIC21.21■□□□□ 0.99
TNFRSF25Q93038 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF25Q93038 KRT8P7-201ENST00000533003 1432 ntBASIC21.21■□□□□ 0.99
TNFRSF25Q93038 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TNFRSF25Q93038 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
TNFRSF25Q93038 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
TNFRSF25Q93038 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 KRT18P23-201ENST00000435622 1283 ntBASIC21.2■□□□□ 0.98
TNFRSF25Q93038 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TNFRSF25Q93038 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.19■□□□□ 0.98
TNFRSF25Q93038 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 SEC1P-202ENST00000473944 940 ntBASIC21.19■□□□□ 0.98
TNFRSF25Q93038 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFRSF25Q93038 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.18■□□□□ 0.98
TNFRSF25Q93038 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 AC104390.1-201ENST00000555663 520 ntBASIC21.18■□□□□ 0.98
TNFRSF25Q93038 AC112497.1-201ENST00000624824 639 ntBASIC21.18■□□□□ 0.98
TNFRSF25Q93038 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 AC141257.4-201ENST00000634557 245 ntBASIC21.18■□□□□ 0.98
TNFRSF25Q93038 AC136944.6-201ENST00000634818 245 ntBASIC21.18■□□□□ 0.98
TNFRSF25Q93038 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms