Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.86■■□□□ 1.41
SMARCC1Q92922 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMARCC1Q92922 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.85■■□□□ 1.41
SMARCC1Q92922 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMARCC1Q92922 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMARCC1Q92922 AF186996.4-201ENST00000467186 377 ntBASIC23.85■■□□□ 1.41
SMARCC1Q92922 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.85■■□□□ 1.41
SMARCC1Q92922 KRT18P58-201ENST00000527480 1120 ntBASIC23.85■■□□□ 1.41
SMARCC1Q92922 SLC25A1P1-201ENST00000528351 927 ntBASIC23.85■■□□□ 1.41
SMARCC1Q92922 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.85■■□□□ 1.41
SMARCC1Q92922 MIR5100-201ENST00000579544 119 ntBASIC23.85■■□□□ 1.41
SMARCC1Q92922 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.85■■□□□ 1.41
SMARCC1Q92922 BNIP3P18-201ENST00000593976 575 ntBASIC23.85■■□□□ 1.41
SMARCC1Q92922 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
SMARCC1Q92922 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
SMARCC1Q92922 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMARCC1Q92922 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMARCC1Q92922 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMARCC1Q92922 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.84■■□□□ 1.41
SMARCC1Q92922 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMARCC1Q92922 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.84■■□□□ 1.41
SMARCC1Q92922 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMARCC1Q92922 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMARCC1Q92922 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMARCC1Q92922 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.83■■□□□ 1.41
SMARCC1Q92922 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMARCC1Q92922 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMARCC1Q92922 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SMARCC1Q92922 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 AC093909.1-201ENST00000504731 1122 ntBASIC23.83■■□□□ 1.41
SMARCC1Q92922 RNPS1P1-201ENST00000507437 918 ntBASIC23.83■■□□□ 1.41
SMARCC1Q92922 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.83■■□□□ 1.41
SMARCC1Q92922 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMARCC1Q92922 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SMARCC1Q92922 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.83■■□□□ 1.4
SMARCC1Q92922 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SMARCC1Q92922 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SMARCC1Q92922 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC1Q92922 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SMARCC1Q92922 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC1Q92922 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMARCC1Q92922 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC1Q92922 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMARCC1Q92922 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SMARCC1Q92922 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC1Q92922 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.81■■□□□ 1.4
SMARCC1Q92922 AC114341.1-201ENST00000618070 349 ntBASIC23.81■■□□□ 1.4
SMARCC1Q92922 AC068587.9-201ENST00000641814 219 ntBASIC23.81■■□□□ 1.4
SMARCC1Q92922 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC1Q92922 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC1Q92922 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC1Q92922 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC1Q92922 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms