Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
AP3S1Q92572 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.47■□□□□ 0.23
AP3S1Q92572 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S1Q92572 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3S1Q92572 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 AL645608.8-201ENST00000606034 2086 ntBASIC16.47■□□□□ 0.23
AP3S1Q92572 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3S1Q92572 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP3S1Q92572 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.46■□□□□ 0.23
AP3S1Q92572 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3S1Q92572 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP3S1Q92572 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
AP3S1Q92572 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3S1Q92572 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3S1Q92572 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
AP3S1Q92572 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.46■□□□□ 0.22
AP3S1Q92572 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.46■□□□□ 0.22
AP3S1Q92572 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.46■□□□□ 0.22
AP3S1Q92572 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP3S1Q92572 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.46■□□□□ 0.22
AP3S1Q92572 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.46■□□□□ 0.22
AP3S1Q92572 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3S1Q92572 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
AP3S1Q92572 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S1Q92572 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3S1Q92572 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3S1Q92572 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3S1Q92572 CYP2T3P-201ENST00000601990 817 ntBASIC16.45■□□□□ 0.22
AP3S1Q92572 AL589743.5-201ENST00000616611 1050 ntBASIC16.45■□□□□ 0.22
AP3S1Q92572 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3S1Q92572 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3S1Q92572 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S1Q92572 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
AP3S1Q92572 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
AP3S1Q92572 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3S1Q92572 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3S1Q92572 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3S1Q92572 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3S1Q92572 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3S1Q92572 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms