Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRFBP1Q8NEF9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 AL138781.2-201ENST00000617896 1843 ntBASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 AC007663.1-201ENST00000438948 1240 ntBASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 TSPY15P-201ENST00000457163 923 ntBASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 AP003041.3-201ENST00000527151 707 ntBASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.82■□□□□ 0.44
SRFBP1Q8NEF9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 AC004408.2-201ENST00000623613 2777 ntBASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 ANO7L1-203ENST00000602586 1720 ntBASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 MIR3180-5-201ENST00000583743 153 ntBASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 LETM1P2-201ENST00000597330 2178 ntBASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRFBP1Q8NEF9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AL357033.4-201ENST00000617703 1807 ntBASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AC010947.1-201ENST00000623454 693 ntBASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AC008556.1-201ENST00000610908 2040 ntBASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AC112777.1-201ENST00000540175 1423 ntBASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRFBP1Q8NEF9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRFBP1Q8NEF9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms