Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SYCP3Q8IZU3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.61■□□□□ 0.89
SYCP3Q8IZU3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.61■□□□□ 0.89
SYCP3Q8IZU3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 AC008556.1-201ENST00000610908 2040 ntBASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 INGX-201ENST00000359239 846 ntBASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 AL109659.2-201ENST00000606809 1674 ntBASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYCP3Q8IZU3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 ECEL1P2-202ENST00000465689 757 ntBASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 Z98044.1-201ENST00000632503 1764 ntBASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 AC093525.10-201ENST00000625130 1569 ntBASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYCP3Q8IZU3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 HTR7P1-202ENST00000624664 4411 ntBASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 MIR4674-201ENST00000582457 87 ntBASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 AC010653.2-201ENST00000623505 997 ntBASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 AC133561.5-201ENST00000635547 218 ntBASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.58■□□□□ 0.89
SYCP3Q8IZU3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.58■□□□□ 0.88
SYCP3Q8IZU3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYCP3Q8IZU3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.58■□□□□ 0.88
SYCP3Q8IZU3 MTMR9LP-203ENST00000426597 1545 ntBASIC20.58■□□□□ 0.88
SYCP3Q8IZU3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 KRT18P22-201ENST00000402024 1347 ntBASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 AL031598.1-201ENST00000561511 1773 ntBASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYCP3Q8IZU3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms