Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 AC063952.2-201ENST00000498792 1227 ntBASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 NEK4P2-201ENST00000580004 1012 ntBASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 AC011558.1-201ENST00000623459 338 ntBASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 AC036111.1-201ENST00000533973 1582 ntBASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRIM48Q8IWZ4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 AC090340.1-201ENST00000620778 4980 ntBASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM48Q8IWZ4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 MIR3180-5-201ENST00000583743 153 ntBASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM48Q8IWZ4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 HOMER2P1-201ENST00000455653 964 ntBASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM48Q8IWZ4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms