Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
UBR1Q8IWV7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
UBR1Q8IWV7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC26.55■■□□□ 1.84
UBR1Q8IWV7 AL357033.4-201ENST00000617703 1807 ntBASIC26.55■■□□□ 1.84
UBR1Q8IWV7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
UBR1Q8IWV7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
UBR1Q8IWV7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
UBR1Q8IWV7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
UBR1Q8IWV7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
UBR1Q8IWV7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
UBR1Q8IWV7 LBH-204ENST00000406087 559 ntTSL 4 BASIC26.54■■□□□ 1.84
UBR1Q8IWV7 AC113404.2-201ENST00000507884 177 ntBASIC26.54■■□□□ 1.84
UBR1Q8IWV7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC26.54■■□□□ 1.84
UBR1Q8IWV7 FAM197Y3-203ENST00000618346 717 ntBASIC26.54■■□□□ 1.84
UBR1Q8IWV7 AC068587.9-201ENST00000641814 219 ntBASIC26.54■■□□□ 1.84
UBR1Q8IWV7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
UBR1Q8IWV7 Z98044.1-201ENST00000632503 1764 ntBASIC26.54■■□□□ 1.84
UBR1Q8IWV7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 AC012640.2-201ENST00000561606 901 ntBASIC26.53■■□□□ 1.84
UBR1Q8IWV7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
UBR1Q8IWV7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 AC007375.3-201ENST00000600936 2314 ntBASIC26.52■■□□□ 1.84
UBR1Q8IWV7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 AP001160.2-201ENST00000596071 487 ntBASIC26.52■■□□□ 1.84
UBR1Q8IWV7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC26.52■■□□□ 1.84
UBR1Q8IWV7 AC022898.2-201ENST00000616822 1312 ntBASIC26.52■■□□□ 1.84
UBR1Q8IWV7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC26.51■■□□□ 1.84
UBR1Q8IWV7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC26.51■■□□□ 1.84
UBR1Q8IWV7 LINC01521-201ENST00000504184 1943 ntBASIC26.51■■□□□ 1.84
UBR1Q8IWV7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 YBX2P1-201ENST00000394192 760 ntBASIC26.51■■□□□ 1.83
UBR1Q8IWV7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 ANKRD20A8P-203ENST00000641373 517 ntBASIC26.51■■□□□ 1.83
UBR1Q8IWV7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 MIR940-201ENST00000401276 94 ntBASIC26.51■■□□□ 1.83
UBR1Q8IWV7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
UBR1Q8IWV7 SART3-203ENST00000546611 1184 ntBASIC26.51■■□□□ 1.83
UBR1Q8IWV7 AL138831.2-201ENST00000606564 490 ntBASIC26.51■■□□□ 1.83
UBR1Q8IWV7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 AL356488.2-201ENST00000602755 427 ntBASIC26.5■■□□□ 1.83
UBR1Q8IWV7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC26.5■■□□□ 1.83
UBR1Q8IWV7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 AC112777.1-201ENST00000540175 1423 ntBASIC26.49■■□□□ 1.83
UBR1Q8IWV7 AC104109.2-201ENST00000602919 1418 ntBASIC26.49■■□□□ 1.83
UBR1Q8IWV7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
UBR1Q8IWV7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
UBR1Q8IWV7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
UBR1Q8IWV7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
UBR1Q8IWV7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
UBR1Q8IWV7 AL591424.1-201ENST00000442569 1213 ntBASIC26.48■■□□□ 1.83
UBR1Q8IWV7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms