Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC093484.2-201ENST00000580996 2166 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC093915.1-201ENST00000605740 1543 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 DNAJB3-202ENST00000449667 1266 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 MTATP6P9-201ENST00000515039 680 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 C1QL1P1-201ENST00000568105 661 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 MTND4LP25-201ENST00000570218 163 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 NDE1P2-201ENST00000605569 1105 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AP003399.1-201ENST00000637534 361 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC007952.6-201ENST00000573168 2673 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC003957.1-201ENST00000625108 2673 ntBASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
PPP4R3CPQ6ZMV5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 RN7SL519P-201ENST00000497925 288 ntBASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 GTF2IP6-201ENST00000583143 541 ntBASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC073195.1-201ENST00000607241 877 ntBASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 AL137796.1-201ENST00000608190 577 ntBASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC21.54■■□□□ 1.04
PPP4R3CPQ6ZMV5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC005332.7-201ENST00000614046 2005 ntBASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC117434.1-201ENST00000419971 836 ntBASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 TSPY7P-201ENST00000431358 1114 ntBASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC089999.1-201ENST00000460336 374 ntBASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC100847.1-201ENST00000611316 481 ntBASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 AL050303.3-201ENST00000613704 284 ntBASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3CPQ6ZMV5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms