Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TTC39BQ5VTQ0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 AC073508.3-201ENST00000619697 1419 ntBASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 KRT18P21-201ENST00000515767 1272 ntBASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39BQ5VTQ0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 TMPOP1-202ENST00000424642 1267 ntBASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 AC010203.1-204ENST00000548782 407 ntBASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39BQ5VTQ0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 RN7SL850P-201ENST00000579959 291 ntBASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC39BQ5VTQ0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC39BQ5VTQ0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms