Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPF38BQ5VTL8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 AC005229.4-201ENST00000610085 2198 ntBASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 AP000344.2-201ENST00000512987 629 ntBASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 AC104390.1-201ENST00000555663 520 ntBASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 AC025678.2-201ENST00000562061 970 ntBASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.2■□□□□ 0.82
PRPF38BQ5VTL8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 KRT8P7-201ENST00000533003 1432 ntBASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 AC236430.1-201ENST00000402231 743 ntBASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPF38BQ5VTL8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 INGX-202ENST00000489074 768 ntBASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 CR383656.12-201ENST00000549567 513 ntBASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRPF38BQ5VTL8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
PRPF38BQ5VTL8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms