Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 WWOX-216ENST00000569818 525 ntBASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 AC073912.3-201ENST00000624414 853 ntBASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN20Q4JDL3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN20Q4JDL3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.64■□□□□ 0.74
PTPN20Q4JDL3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN20Q4JDL3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 AC145285.6-201ENST00000604632 637 ntBASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 AC112777.1-201ENST00000540175 1423 ntBASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 AC034236.2-201ENST00000606662 1610 ntBASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN20Q4JDL3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 AC090164.3-201ENST00000610780 2143 ntBASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PTPN20Q4JDL3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 AC073592.3-201ENST00000625118 1834 ntBASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN20Q4JDL3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 NEFHP1-201ENST00000412845 2629 ntBASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 KRT8P50-201ENST00000562022 1438 ntBASIC19.61■□□□□ 0.73
PTPN20Q4JDL3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms